uroborus openbioinformatics.org

UROBORUS Documentation

Documentation for UROBORUS software
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The circular RNA world

Latest in research from the circRNA world. Monday, 18 July 2016. Yu-Chen Liu and colleagues at the Institute of Bioinformatics and Systems Biology, National Chiao Tung University, HsinChu, Taiwan has created a unique web resource CircNet. Creation of this resource systematically utilized transcriptome sequencing data sets to identify the expression of circRNAs in 464 RNA-seq samples.

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TITLE

UROBORUS Documentation

DESCRIPTION

Documentation for UROBORUS software

CONTENT

This web site states the following, "UROBORUS is a computational pipeline to detect circular RNA from RNA-Seq data, based on junction reads from back spliced exons." Our analyzers noticed that the web site also said "pl, you should use TopHat to align the reads to genome, and get the unmapped." The Website also said " If the genome sequence in each chromosome chr1. The path for genome sequence should be set as. The following three software should be installed in your cluster or computer before running the UROBORUS. Tophat -p 6 -o RL 9 ."

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